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EthnoHack 2026 Primary Track: Traditional Knowledge Mining
Backend Service:CONNECTING

Make Traditional Knowledge
Scientifically Traceable

EthnoWeave transforms fragmented ethnobotanical reports into a provenance-first intelligence graph — connecting traditional community use to Kew POWO taxonomy, PubChem structures, ChEMBL bioassays, and real Google Maps geospatial biodiversity data.

Trace the tradition. Verify the evidence. Protect the source.

Traceable Provenance Flow/Live Evidence Pipeline Example
01Field Survey

Ethnobotanical Record

Bhola Island Survey (DOI: 10.5281/zenodo.18528943)

Informant RFC: 0.83 • Folk indication: Hypertension
02Kew POWO Resolved

Botanical Taxon

Rauvolfia serpentina (L.) Benth. ex Kurz

Apocynaceae • GBIF Taxon Key: 3170068
03Phytochemistry

Isolated Metabolite

Reserpine (PubChem CID: 5770)

C33H40N2O9 • Indole alkaloid
04In-Vitro Assay

Bioactivity & Target

VMAT2 (UniProt: Q05940) • ChEMBL34

IC50: 12.4 nM • Vesicular monoamine transporter
0510km Fuzzed GPS

Ecosystem Stewardship

IUCN Vulnerable (A2cd) • Bangladesh

Monpura Island • Protected coordinate centroid
Graph Traversal: 4 hops•Target Confidence: 0.98•Verification: Source Verified
Verification Integrity: Uncompromised
CC BY 4.0
Azadirachta indica A.Juss.
Botanical Field Photo
Azadirachta indica A.Juss.
Vernacular: Neem (নিম)
  • Imparipinnate compound leaves
  • Serrate leaf margins
  • Acuminate apex
Botanical Specimen & REMP Dataset (DOI: 10.17632/hnwrxg8zm8.1)Dossier
12
Documented Plants
Bhola & REMP Taxa
24
Survey Claims
Informant Attributed
14
Isolated Compounds
PubChem CIDs & SMILES
9
Target Assays
ChEMBL 34 Measurements
20
Geo Occurrences
All 8 BD Divisions
4
Research Gaps
Indexed Evidence Gaps
The Research Problem

Why Traditional Knowledge Fails Modern Drug Discovery

Centuries of indigenous healing observations remain isolated from modern biomedical science due to severe taxonomic ambiguity, missing provenance, and biopiracy risks.

01

Taxonomic Fragmentation

Over 80% of indexed ethnopharmacology publications use outdated botanical synonyms (e.g. Ocimum sanctum vs accepted Ocimum tenuiflorum), fragmenting chemical and assay citations across disconnected databases.

02

Evidence Disconnect

Generic databases often conflate in-vitro enzymatic inhibition with clinical efficacy or historical folk claims, leading to reproducibility failures and unsubstantiated medicinal claims.

03

Over-Harvesting & Poaching

Publishing exact GPS coordinates of high-value medicinal plants without protection leads to illegal collection and local extinction of critically endangered taxa like Rauvolfia serpentina.

Scientific Methodology

The 5-Stage Evidence Pipeline

Every connection in EthnoWeave follows an unbroken chain of custody from informant citation to molecular validation.

01

Ethnobotanical Mining

Survey records & informant interviews extracted with exact passage, informant consensus (ICF), and citation frequencies.

02

Taxonomic Harmonization

Vernacular Bengali names reconciled against Kew POWO and GBIF backbone. Synonyms and homonyms flagged.

03

Phytochemical Resolution

Isolated natural products mapped to PubChem CIDs, SMILES, and 2D chemical topologies with chromatographic evidence.

04

Bioactivity & Target Assays

Experimental IC50/Ki measurements mapped to human UniProt protein targets, categorizing in-vitro vs in-vivo.

05

Geospatial Stewardship

Occurrences mapped across all 8 divisions with server-side 10km grid centroid fuzzing for threatened species.

Track Coverage

Three Research Tracks in One Evidence Graph

EthnoWeave directly addresses the international hackathon evaluation rubrics across all three designated tracks.

Track 1 • Primary Track

Traditional Knowledge Mining

Extracts, normalizes, and disambiguates field surveys from Bhola District (Rabbi, 2026; DOI: 10.5281/zenodo.18528943). Preserves vernacular Bengali names, informant counts (100 informants), relative frequency of citation (RFC), and exact text citations.

DOI: 10.5281/zenodo.18528943Rule-Based Mining
Track 2 • Supporting Track

Natural Products Discovery

Integrates PubChem chemical topologies and ChEMBL 34 bioassays. Rigorously differentiates in-vitro measurements (IC50, Ki) from in-vivo and clinical trials, preventing unfounded claims while validating druggable targets.

ChEMBL 34 & PubChem PUGMolecular Lab
Track 3 • Supporting Track

Biodiversity & Sustainability

Connects species to geographic occurrence data from GBIF and coastal island surveys across all 8 Bangladesh administrative divisions. Enforces server-side 10km grid location fuzzing for endangered medicinal taxa.

Live Google Map & GBIFGoogle Maps View
Evidence Integrity

Every Assertion Carries Full Scientific Provenance

Methodology & Validation

Traceable Evidence Records

Unlike opaque AI aggregators, EthnoWeave stores exact quotations, page numbers, publication DOIs, and taxonomic reviewer identities for every plant claim in the database.

Sample: Azadirachta indica (Neem)
Source: Rabbi (2026), Section 4.2, p. 18
Licence: Not specified / permission required for reuse

Four Verification States

Claims are never presented as proven medicine without rigorous verification:

CANDIDATE
Extracted by parser, awaiting check
REVIEWED
Reviewed by taxonomist
SOURCE_VERIFIED
Confirmed against publication
EXPERIMENTALLY_REPORTED
Supported by bioassay IC50/Ki
Source Transparency

Authoritative Data Foundations

EthnoWeave respects scientific copyright and attribution terms. Licences and DOIs are explicitly reported.

Bhola Island Survey
DOI: 10.5281/zenodo.18528943
Creator: Rifat Hasan Rabbi (2026)
Licence: Not specified / permission required

Primary field survey conducted June–Dec 2025 across 7 Upazilas with 100 informants documenting 39 medicinal species.

REMP Leaf Image Dataset
DOI: 10.17632/hnwrxg8zm8.1
Mendeley Data (2024)
Licence: CC BY 4.0

3,494 leaf images across 16 medicinal plant classes in Bangladesh, curated for morphological verification.

ChEMBL 34 & PubChem
DOI: 10.1093/nar/gkt1070
EMBL-EBI & NIH / NLM
Licence: CC BY-SA 3.0 / Open Access

Structured bioassays, molecular target identifiers, canonical SMILES, and binding affinities.

Zero Mock Fallback Guarantee: All Metrics Sourced Directly From Database

Ready to Investigate Ethnobotanical Evidence?

Trace verified relationships across botanical taxonomy, phytochemical isolates, experimental bioactivity, and geographic distribution.